1. Introduction
In the period of dynamic technical development, the large number of drugs and pharmaceutical techniques has been emerging every year which requires the massive amount of work to examine the biological and chemical properties of these drugs. Also, lots of experiments have to be done on these new drugs to find out the side effects and benefits on human body. These heavy works loaded experiments in laboratories may affect the impoverished countries especially Africa and Southeast Asia. During the initial stages of chemical experiments, the scientists have compared the structure of the compounds and its experimental values and pointed that they are closely related [1] [2]. Calculating the properties of the molecular structure of the compounds in terms of topological indices, the pharmaceutical and medical scholars may find them useful in studying the medicinal properties of the drugs.
In the modeling of medical mathematics, the structure of medicine is considered as an undirected graph, where the vertices and edges are considered to be atoms and the chemical bonds respectively. The information pertaining physiochemical properties and the biological activities of molecular graph of compounds are important in pharmaceutical drug design. These properties can be anticipated without any use of laboratories but by a conventional aid of chemical graph theory known as the topological index. A graphical index is a numeric value corresponding to a graph which is structurally invariant and in molecular graph theory these invariants are known as topological indices. The first and second Zagreb indices are extensively studied among the various classes of topological indices and have many applications in the molecular graph theory. The Zagreb indices play a vital role in the theory of total π-electron energy of alternant hydrocarbons. Gutman and Trinajstic introduced the first and second Zagreb indices in 1972 [3].
With reference to the previous deadly diseases, the COVID-19 pandemic has considered to be the biggest life threatening issue that modern medicines have ever tackled. The scientists and doctors have been working tirelessly in finding the drugs which may save the sufferers and may even protect them from getting affected. As of 26th August 2020, there were more than 24 million reported resulting in 819,000 deaths and 16,620,943 have been recovered across 188 countries and territories (from world meters information). COVID-19 is immedicable and even the existing treatments are only helping the certain group of sufferers. No treatment has been fully licensed by the food and the drug administration agency for COVID-19.
Scientists have tested some of the available antiviral agents and got a favorable impact on recovering from pandemic by using remdesivir, chloroquine, hydroxychloroquine, theaflavin and dexamethasone. The first drug to get the emergency approval from food and drug administration for the use of COVID-19 is remdesivir. It ceases the reproduction of the virus. This drug was initially used as an antiviral agent for Hepatitis C and Ebola. From the preliminary trials, it has been observed that the drug can reduce the recovery time of the COVID-19 sufferers from 15 days to 11 days. In 1930s the German scientists incorporated chloroquine as a drug against malaria. In 1946, the scientists invented the less toxic version of chloroquine called hydroxychloroquine and later the drug was approved for other diseases also. During the initial stages of the deadly pandemic, the scientists have found that both chloroquine and hydroxychloroquine can control the virus from reproducing the cells [4]. Initial reports from France and China have proposed that by giving chloroquine or hydroxychloroquine, the COVID-19 sufferers are recovered quickly. Theaflavin is a polyphenol chemical found in black tea which acts as an antiviral agent in the treatment of influenza A, B and hepatitis C virus. Lung et al. [5] have suggested that this drug can be used as a primary factor in producing a drug against COVID-19. British researchers on 17th July, 2020 published that dexamethasone improves the immune response of the Covid-19 positives. The recovery collaborative group of researchers has found that this drug reduces the death rate of patients on ventilators by one-third and for the patients on oxygen by one-fifth. But it may be less effective and even may be harmful for the patients who are at an earlier stage of COVID-19 infections [6]. However, in the COVID-19 treatment guidelines, the National Institutes of Health recommends only using dexamethasone in patients with COVID-19 who are on a ventilator or are receiving supplemental oxygen. For more application of topological indices, see [7] - [16].
2. Mdn-Polynomial and Downhill Zagreb Polynomials
Let
be a graph of order
. The open neighborhood of a vertex
is the set
, while the closed neighborhood is the set
. Each vertex in
is called a neighbor of v, and
is called the degree of v, and denoted
. Any terminology in graph theory not defined here, we refer the reader to [17].
Definition 2.1. [18] Let
be a graph. A
path P in G is a sequence of vertices in G, starting with u and ending at v, such that consecutive vertices in P are adjacent, and no vertex is repeated. A path
in G is a downhill path if for everyi,
,
.
Definition 2.2. A vertex v is downhill dominates a vertex u if there exists a downhill path originated from v to u. The downhill neighborhood of a vertex v is denotes by
and define as
The downhill degree of the vertexv, denotes by
, is the number of downhill neighbors of v, that means
.
Definition 2.3. [19] Let
be a graph. Then the first, second and forgotten downhill Zagreb indices are defined by
and
Definition 2.4. [20] Let
be a graph. Then the first, second and forgotten downhill Zagreb polynomials are defined by
and
Definition 2.5. The Mdn-polynomial of G is defined as
where
and
is the number of edges
such that
and
.
Definition 2.6. Let
be a graph. Then the first, second and forgotten downhill modified Zagreb indices are defined by
and
Table 1 presented relates some of these downhill degree—based topological indices with the downhill Zagreb polynomials and Mdn-polynomial with the following reserved notations
3. Methodology
We associated the graphs with the chemical structures of remdesivir, chloroquine, hydroxychloroquine, theaflavin and dexamethasone where atoms are represented by vertices and chemical bonds are represented by edges. Then by using the symmetry of the molecular structures of remdesivir, chloroquine, hydroxychloroquine,
Table 1. Derivation of some topological indices from the downhill Zagreb polynomials (DZP) and Mdn-polynomial.
theaflavin and dexamethasone we counted the edges and vertices by a simple counting method. By applying the formula of the polynomial, we derived the downhill Zagreb polynomials and Mdn-polynomial of remdesivir, chloroquine, hydroxychloroquine, theaflavin and dexamethasone. From these downhill Zagreb polynomials and Mdn-polynomial we recovered 5 downhill degree-based topological indices by using Derivation. We used Matlab 2017 to plot our results.
4. Main Results
In this section, we give our main computational results. We compute downhill Zagreb polynomials and Mdn-polynomial of molecular graph of remdesivir.
Theorem 4.1. Let G be the molecular graph of remdesivir. Then,
Proof. Let G be the molecular graph of remdesivir (Figure 1 ). It has 41 vertices in which one vertex of downhill degree 19, 4 vertices of downhill degree 9, 3 vertices of downhill degree 7, 4 vertices of downhill degree 6, one vertex of downhill degree 5, 5 vertices of downhill degree 4, 3 vertices of downhill degree 2, 8 vertices of downhill degree 1 and 12 vertices of downhill degree 0.
Then,
is obtained as follows.
The graph G has 44 edges. Suppose that
and
. In a graph G there are 20 types of edges based on the downhill degree of the vertices of each edge. From Figure 1, we have
,
,
,
,
,
,
,
,
,
,
,
,
,
,
,
,
,
,
and
.
Figure 1. Chemical structure of remdesivir.
Then,
is obtained as follows.
Now, we calculate
similar to
, then
Figure 2 is a 3D plot of remdesivir downhill Zagreb polynomials.
Theorem 4.2. Let G be the molecular graph of remdesivir. Then,
Proof. From Theorem 4.1 and using the definition
, we have
Figure 2. Plotting of remdesivir downhill Zagreb polynomials. (a) DWM1 (G, x); (b) DWM2 (G, x); (c) DWF (G, x).
Figure 3 is a 3D plot of Mdn-polynomial of remdesivir.
Now using the Theorem 4.1, we calculate the first, second and forgotten downhill Zagreb indices of the molecular graph of remdesivir in the following theorem.
Theorem 4.3. Let G be the molecular graph of remdesivir. Then,
Proof. Let
.
Then
From Table 1 ,
For
, let
Then
From Table 1,
Now, for
. Let
Then
Figure 3. Plotting of Mdn-polynomial of remdesivir.
From Table 1 ,
Now using the Theorem 4.2, we calculate the first, second and forgotten downhill modified Zagreb indices of the molecular graph of remdesivir in the following theorem.
Theorem 4.4. Let G be the molecular graph of remdesivir. Then,
Proof. Let
Then
Using Table 1, we have
We evaluate the downhill Zagreb polynomials and Mdn-polynomial of the molecular graph of chloroquine in the following two theorems.
Theorem 4.5. Let G be the molecular graph of chloroquine. Then,
Proof. Let G be the molecular graph of chloroquine (Figure 4 ). It has 22 vertices in which 3 vertices of downhill degree 9, one vertex of downhill degree 7,
Figure 4. Chemical structure of chloroquine.
one vertex of downhill degree 5, one vertex of downhill degree 4, 6 vertices of downhill degree 2, 4 vertices of downhill degree 1 and 6 vertices of downhill degree 0.
Then,
is obtained as follows.
The graph G has 23 edges. In a graph G there are 13 types of edges based on the downhill degree of the vertices of each edge. From Figure 4, we have
,
,
,
,
,
,
,
,
,
,
,
and
.
Then,
is obtained as follows.
Now, we calculate
similar to
, then
Figure 5 is a 3D plot of downhill Zagreb polynomials of chloroquine.
Theorem 4.6. Let G be the molecular graph of chloroquine. Then,
Proof. From Theorem 4.5 and using the definition
, we have
Figure 5 . Plotting of downhill Zagreb polynomials of chloroquine. (a) DWM1 (G, x); (b) DWM2 (G, x); (c) DWF (G, x).
Figure 6 is a 3D plot of Mdn-polynomial of chloroquine.
Now using the Theorem 4.5, we calculate the first, second and forgotten downhill Zagreb indices of the molecular graph of chloroquine in the following theorem.
Theorem 4.7. Let G be the molecular graph of chloroquine. Then,
Proof. The proof similarly to the proof of Theorem 4.3.
Now using the Theorem 4.6, we calculate the first, second and forgotten downhill modified Zagreb indices of the molecular graph of chloroquine in the following theorem.
Theorem 4.8. Let G be the molecular graph of chloroquine. Then,
Proof. The proof similarly to the proof of Theorem 4.4.
We evaluate the downhill Zagreb polynomials and Mdn-polynomial of the molecular graph of hydroxychloroquine in the following two theorems.
Theorem 4.9. Let G be the molecular graph of hydroxychloroquine. Then,
Figure 6 . Plotting of Mdn-polynomial of chloroquine.
Proof. Let G be the molecular graph of hydroxychloroquine (Figure 7). It has 23 vertices in which 3 vertices of downhill degree 9, one vertex of downhill degree 8, one vertex of downhill degree 5, one vertex of downhill degree 4, 8 vertices of downhill degree 2, 3 vertices of downhill degree 1 and 6 vertices of downhill degree 0.
Then,
is obtained as follows.
The graph G has 24 edges. In a graph G there are 14 types of edges based on the downhill degree of the vertices of each edge. From Figure 7, we have
,
,
,
,
,
,
,
,
,
,
,
,
and
.
Then,
is obtained as follows.
Now, we calculate
similar to
, then
Theorem 4.10. Let G be the molecular graph of hydroxychloroquine. Then,
Figure 7 . Chemical structure of hydroxychloroquine.
Proof. From Theorem 4.9 and using the definition
, we have
Figure 8 is a 3D plot of downhill Zagreb polynomials of hydroxychloroquine.
Figure 9 is a 3D plot of Mdn-polynomial of hydroxychloroquine.
Now by using the Theorem 4.9, we calculate the first, second and forgotten downhill Zagreb indices of the molecular graph of hydroxychloroquine in the following theorem.
Theorem 4.11. Let G be the molecular graph of hydroxychloroquine. Then,
Proof. The proof similarly to the proof of Theorem 4.3.
Now, by using the Theorem 4.10, we can calculate the first, second and forgotten downhill modified Zagreb indices of the molecular graph of hydroxychloroquine in the following theorem.
Theorem 4.12. Let G be the molecular graph of hydroxychloroquine. Then,
Proof. The proof is similar to the proof of Theorem 4.4.
We evaluate the downhill Zagreb polynomials and Mdn-polynomial of the molecular graph of theaflavin in the following two results.
Figure 8 . Plotting of downhill Zagreb polynomials of hydroxychloroquine. (a) DWM1 (G, x); (b) DWM2 (G, x); (c) DWF (G, x).
Figure 9. Plotting of Mdn-polynomial of hydroxychloroquine.
Theorem 4.13. Let G be the molecular graph of theaflavin. Then,
Proof. Let G be the molecular graph of theaflavin (Figure 10 ). It has 41 vertices in which 9 vertices of downhill degree 18, 9 vertices of downhill degree 7, 2 vertices of downhill degree 3 and 21 vertices of downhill degree 0.
Then,
is obtained as follows.
The graph G has 46 edges. In a graph G there are 5 types of edges based on the downhill degree of the vertices of each edge. From Figure 10 , we have
,
,
,
and
.
Then,
is obtained as follows.
Now, we calculate
similar to
, then
Figure 11 is a 3D plot of theaflavin downhill Zagreb polynomials.
Theorem 4.14. Let G be the molecular graph of theaflavin. Then,
Proof. From Theorem 4.13 and using the definition
, we have
Figure 12 is a 3D plot of Mdn-polynomial of theaflavin.
Now using the Theorem 4.13, we calculate the first, second and forgotten downhill Zagreb indices of the molecular graph of theaflavin in the following theorem.
Theorem 4.15. Let G be the molecular graph of theaflavin. Then,
Proof. The proof similarly to the proof of Theorem 4.3.
Now, by using the Theorem 4.14, we can calculate the first, second and forgotten downhill modified Zagreb indices of the molecular graph of theaflavin in the following result.
Theorem 4.16. Let G be the molecular graph of theaflavin. Then,
Proof. The proof similarly to the proof of Theorem 4.4.
Figure 11. Plotting of theaflavin downhill Zagreb polynomials. (a) DWM1 (G, x); (b) DWM2 (G, x); (c) DWF (G, x).
Figure 12. Plotting of Mdn-polynomial of theaflavin.
We evaluate the downhill Zagreb polynomials and Mdn-polynomial of the molecular graph of dexamethasone in the following two results.
Theorem 4.17. Let G be the molecular graph of dexamethasone. Then,
Proof. Let G be the molecular graph of dexamethasone (Figure 13). It has 28 vertices in which 4 vertices of downhill degree 15, 3 vertices of downhill degree 4, 2 vertices of downhill degree 3, 2 vertices of downhill degree 2, 5 vertices of downhill degree 1 and 12 vertices of downhill degree 0.
Then,
is obtained as follows.
The graph G has 31 edges. In a graph G there are 14 types of edges based on the downhill degree of the vertices of each edge. From Figure 13 , we have
,
,
,
,
,
,
,
,
,
,
,
,
and
.
Then,
is obtained as follows.
Figure 13. Chemical structure of dexamethasone.
Now, we calculate
similar to
, then
Figure 14 is a plot of dexamethasone downhill Zagreb polynomials.
Theorem 4.18. Let G be the molecular graph of dexamethasone. Then,
Proof. From Theorem 4.17 and using the definition
, we have
Now using the Theorem 4.17, we calculate the first, second and forgotten downhill Zagreb indices of the molecular graph of dexamethasone in the following theorem.
Theorem 4.19. Let G be the molecular graph of dexamethasone. Then,
Proof. The proof similarly to the proof of Theorem 4.3.
Figure 15 is a 3D plot Mdn-polynomial of dexamethasone.
Figure 14. Plotting of dexamethasone downhill Zagreb polynomials. (a) DWM1 (G, x); (b) DWM2 (G, x); (c) DWF (G, x).
Figure 15. Plotting of Mdn-polynomial of dexamethasone.
Now, by using the Theorem 4.18, we can calculate the first, second and forgotten downhill modified Zagreb indices of the molecular graph of dexamethasone in the following theorem.
Theorem 4.20. Let G be the molecular graph of dexamethasone. Then,
Proof. The proof similarly to the proof of Theorem 4.4.
5. Conclusion
In this research work, some properties and calculations of the chemical compounds which are used for the treatment of COVID-19 in terms of first, second and forgotten downhill Zagreb indices and polynomials are obtained. In particular, remdesivir, chloroquine, hydroxychloroquine, theaflavin and dexamethasone. We evaluate some downhill Zagreb indices, Mdn-polynomial and some downhill Zagreb Polynomials of these structures with 3D graphical representation. As topological indices are very important to predict different properties and activities such as acentric factor, enthalpy, boiling point, critical pressure, entropy, etc. our results and calculations will be useful to maybe developing new drug and vaccine for the treatment of COVID-19.