Prediction of protein folding rates from primary sequence by fusing multiple sequential features

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Journal of Biomedical Science and Engineering

ISSN Print: 1937-6871
ISSN Online: 1937-688X
www.scirp.org/journal/jbise
E-mail: jbise@scirp.org

Google-based Impact Factor: 0.66
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"Prediction of protein folding rates from primary sequence by fusing multiple sequential features"
written by Hong-Bin Shen, Jiang-Ning Song, Kuo-Chen Chou,
published by Journal of Biomedical Science and Engineering, Vol.2 No.3, 2009

has been cited by the following article(s):

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[58]	Two-intermediate model to characterize the structure of fast-folding proteins Journal of Theoretical Biology, 2011 DOI:10.1016/j.jtbi.2011.05.027

[59]	Predicting protein folding rates using the concept of Chou's pseudo amino acid composition Journal of Computational Chemistry, 2011 DOI:10.1002/jcc.21740

[60]	Predicting Protein Folding Rate From Amino Acid Sequence PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2011 DOI:10.3724/SP.J.1206.2010.00380

[61]	iFC2: an integrated web-server for improved prediction of protein structural class, fold type, and secondary structure content Amino Acids, 2011 DOI:10.1007/s00726-010-0721-1

[62]	The dynamical contact order: Protein folding rate parameters based on quantum conformational transitions Science China Life Sciences, 2011 DOI:10.1007/s11427-011-4158-x

[63]	BIOINFORMATIC APPROACHES FOR PREDICTING SUBSTRATES OF PROTEASES Journal of Bioinformatics and Computational Biology, 2011 DOI:10.1142/S0219720011005288

[64]	PREDICTING PROTEIN FOLDING RATE FROM AMINO ACID SEQUENCE Journal of Bioinformatics and Computational Biology, 2011 DOI:10.1142/S0219720011005306

[65]	Three 3D graphical representations of DNA primary sequences based on the classifications of DNA bases and their applications Journal of Theoretical Biology, 2011 DOI:10.1016/j.jtbi.2010.10.018

[66]	Self-similarity analysis of eubacteria genome based on weighted graph Journal of Theoretical Biology, 2011 DOI:10.1016/j.jtbi.2011.03.033

[67]	Wenxiang: a web-server for drawing wenxiang diagrams Natural Science, 2011 DOI:10.4236/ns.2011.310111

[68]	Multitask Learning for Protein Subcellular Location Prediction IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2011 DOI:10.1109/TCBB.2010.22

[69]	Quat-2L: a web-server for predicting protein quaternary structural attributes Molecular Diversity, 2011 DOI:10.1007/s11030-010-9227-8

[70]	Self-similarity analysis of eubacteria genome based on weighted graph Journal of Theoretical Biology, 2011 DOI:10.1016/j.jtbi.2011.03.033

[71]	Two-intermediate model to characterize the structure of fast-folding proteins Journal of Theoretical Biology, 2011 DOI:10.1016/j.jtbi.2011.05.027

[72]	The implications of gene heterozygosity for protein folding and protein turnover Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2010.05.023

[73]	Global and local prediction of protein folding rates based on sequence autocorrelation information Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2010.03.042

[74]	The Burrows–Wheeler similarity distribution between biological sequences based on Burrows–Wheeler transform Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2009.10.033

[75]	A simple method to analyze the similarity of biological sequences based on the fuzzy theory Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2010.05.008

[76]	2D-MH: A web-server for generating graphic representation of protein sequences based on the physicochemical properties of their constituent amino acids Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2010.08.007

[77]	Cellular responding kinetics based on a model of gene regulatory networks under radiotherapy Health, 2010 DOI:10.4236/health.2010.22021

[78]	Prediction of mitochondrial proteins of malaria parasite using split amino acid composition and PSSM profile Amino Acids, 2010 DOI:10.1007/s00726-009-0381-1

[79]	Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2009.11.016

[80]	Prediction of the parallel/antiparallel orientation of beta-strands using amino acid pairing preferences and support vector machines Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2009.12.019

[81]	Plant-mPLoc: A Top-Down Strategy to Augment the Power for Predicting Plant Protein Subcellular Localization PLoS ONE, 2010 DOI:10.1371/journal.pone.0011335

[82]	Analysis and Prediction of the Metabolic Stability of Proteins Based on Their Sequential Features, Subcellular Locations and Interaction Networks PLoS ONE, 2010 DOI:10.1371/journal.pone.0010972

[83]	Protein classification using texture descriptors extracted from the protein backbone image Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2010.03.020

[84]	The Burrows–Wheeler similarity distribution between biological sequences based on Burrows–Wheeler transform Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2009.10.033

[85]	Accurate prediction of protein folding rates from sequence and sequence-derived residue flexibility and solvent accessibility Proteins: Structure, Function, and Bioinformatics, 2010 DOI:10.1002/prot.22727

[86]	Composition-based effective chain length for prediction of protein folding rates Physical Review E, 2010 DOI:10.1103/PhysRevE.82.051930

[87]	PROTEIN SUBCELLULAR MULTI-LOCALIZATION PREDICTION USING A MIN-MAX MODULAR SUPPORT VECTOR MACHINE International Journal of Neural Systems, 2010 DOI:10.1142/S0129065710002206

[88]	The implications of gene heterozygosity for protein folding and protein turnover Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2010.05.023

[89]	Virus-mPLoc: A Fusion Classifier for Viral Protein Subcellular Location Prediction by Incorporating Multiple Sites Journal of Biomolecular Structure and Dynamics, 2010 DOI:10.1080/07391102.2010.10507351

[90]	Linking mutated primary structure of adrenoleukodystrophy protein with X-linked adrenoleukodystrophy Computer Methods in Biomechanics and Biomedical Engineering, 2010 DOI:10.1080/10255840903279974

[91]	Global and local prediction of protein folding rates based on sequence autocorrelation information Journal of Theoretical Biology, 2010 DOI:10.1016/j.jtbi.2010.03.042

[92]	A network-QSAR model for prediction of genetic-component biomarkers in human colorectal cancer Journal of Theoretical Biology, 2009 DOI:10.1016/j.jtbi.2009.07.031

[93]	REVIEW : Recent advances in developing web-servers for predicting protein attributes Natural Science, 2009 DOI:10.4236/ns.2009.12011

[94]	A top-down approach to enhance the power of predicting human protein subcellular localization: Hum-mPLoc 2.0 Analytical Biochemistry, 2009 DOI:10.1016/j.ab.2009.07.046

[95]	Estimation of relative binding free energy based on a free energy variational principle for quantitative structure activity relationship analyses Chemical Physics, 2009 DOI:10.1016/j.chemphys.2009.09.023

[96]	Generalized lattice graphs for 2D-visualization of biological information Journal of Theoretical Biology, 2009 DOI:10.1016/j.jtbi.2009.07.029

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