For the output of wind power system has the characteristics of randomness, volatility and intermittence, the voltage of wind power system fluctuates frequently and voltage sag is one of the most common voltage fluctuations in wind power system. For the problem of voltage sag of wind power system, the limitations of the detection methods such as the square detection method, the half-wave RMS detection method and wavelet transform are summed up, and a new detecting method named Hilbert-huang Transform(HHT) is put forward in this paper, which can detect the voltage sag accurately and timely. In order to solve the problem of end effect in the process of empirical mode decompostion (EMD), a self-adaptive method named improved waveform matching is applied in dealing with the end issue. Voltage fluctuations are reflected by two parameters named voltage amplitude and frequency of each intrinsic mode function (IMF) in HHT. The practicality of the method is verified by Matlab simulation.