Prof. Cizhong Jiang
School of Life Sciences and Technology
Tongji University, China
Email: czjiang@tongji.edu.cn
Qualifications
2004 Ph.D., Genetics, Iowa State University, USA
1998 M.Sc., Genetics, Nankai University, China
1995 B.Sc., Microbiology, Nankai University, China
Publications (Selected)
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Shi J, Hu J, Zhou
Q, Du Y, Jiang C. (2013) PEpiD: a Prostate Epigenetic Database in mammals. PLoS
One, 8(5): e64289.
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Chen G, Shi X, Sun
C, Li M, Zhou Q, Zhang C, Huang J, Qiu Y, Wen X, Zhang Y, Zhang Y, Yang S, Lu
L, Zhang J, Yuan Q, Lu J, Xu G, Xue Y, Jin Z, Jiang C#, Ying M, Liu X. (2013)
VEGF-mediated proliferation of human adipose tissue-derived stem cells. PLoS One, 8(10): e73673.
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Lin J, Chen G, Gu
L, Shen Y, Zheng M, Zheng W, Hu X, Zhang X, Qiu Y, Liu X, Jiang C. (2014)
Phylogenetic affinity of tree shrews to Glires is attributed to fast evolution
rate. Mol. Phylogenet. Evol., 71:193-200.
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Yin R, Gu L, Li M,
Jiang C#, Cao T, Zhang X. (2014) Gene Expression Profiling Analysis of
Bisphenol A-induced Perturbation in Biological Processes in ER-negative HEK 293
Cells. PLoS One, 9(6): e98635.
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Shi J, Zheng M, Ye
Y, Li M, Chen X, Hu X, Sun J, Zhang X, Jiang C. (2014) Drosophila Brahma
complex remodels nucleosome organizations in multiple aspects. Nucleic Acids
Res., 42(15):9730-9.
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Shen J, Jia W, Yu
Y, Chen J, Cao X, Du Y, Zhang X, Zhu S, Chen W, Xi J, Wei T, Wang G, Yuan D,
Duan T, Jiang C#, Kang J. (2014) Pwp1 Is Required for the Differentiation
Potential of Mouse Embryonic Stem Cells through Regulating Stat3 Signaling.
Stem Cells, 2014 Oct 21. doi: 10.1002/stem.1876.
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Tao Y, Zheng W,
Jiang Y, Ding G, Hou X, Tang Y, Li Y, Gao S, Chang G, Zhang X, Liu W, Kou X,
Wang H, Jiang C#, Gao S. (2014) Nucleosome organizations in induced pluripotent
stem cells reprogrammed from somatic cells belonging to three different germ
layers. BMC Biol., 2014 Dec 21; 12(1):109.
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Tang Y, Dong S,
Cao X, Zhou Q, Ding G, Jiang C. (2013) H2A. Z Nucleosome Positioning Has No
Impact on Genetic Variation in Drosophila Genome. PLoS One, 8(3): e58295.
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Chang GS, Noegel
AA, Mavrich TN, Müller R, Tomsho L, Ward E, Felder M, Jiang C, Eichinger L,
Glöckner G, Schuster SC, Pugh BF. (2012) Unusual combinatorial involvement of
poly-A/T tracts in organizing genes and chromatin in Dictyostelium. Genome Res, 22(6):1098-106.
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Venters BJ, Wachi
S, Mavrich TN, Andersen BE, Jena P, Sinnamon AJ, Jain P, Rolleri
NS, Jiang C, Hemeryck-Walsh C, Pugh BF. (2011) A comprehensive genomic
binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol
Cell. 41(4):480-92.
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Zhao, Z and Jiang,
C. (2010) Features of Recent Codon Evolution: A Comparative
Polymorphism-Fixation Study. Journal of Biomedicine and Biotechnology. Volume
2010(2010), Article ID 202918, 9 pages, doi:10.1155/2010/202918.
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Koerber RT, Rhee
HS, Jiang C, Pugh BF. (2009) Interaction of transcriptional regulators with
specific nucleosomes across the Saccharomyces genome. Mol Cell. 35(6):889-902.
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Jiang, Cand Pugh
BF. (2009) A compiled and systematic reference map of nucleosome positions
across the Saccharomycesgenome. Genome Biology, 10: R109.
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Jiang, Cand Pugh
BF. (2009) Nucleosome positioning and gene regulation: advances through
genomics. Nature Reviews Genetics, 10(3): 161-72 Cover Story.
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Mavrich TN, Jiang
C(Co-first author), Ioshikhes IP, Li X, Venters BJ, Zanton SJ, Tomsho LP,
Qi J, Glaser RL, Schuster SC, Gilmour DS, Albert I, Pugh BF. (2008) Nucleosome
organization in the Drosophilagenome. Nature, 453(7193):358-62.
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Mavrich, TN,
Ioshikhes, IP, Venters, BJ, Jiang, C, Tomsho, LP, Qi, J, Schuster, SC, Albert,
I, and Pugh, BF (2008) A barrier nucleosome model for statistical positioning
of nucleosomes throughout the yeast genome.Genome Research, 18(7):1073-83.
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Albert I, Wachi S,
Jiang C, Pugh BF. (2008) Gene Track-a genomic data processing and
visualization framework. Bioinformatics. 24(10): 1305-6.
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Lee C, Li X,
Hechmer A, Eisen M, Biggin MD, Venters BJ, Jiang C, Li J, Pugh BF, Gilmour
DS.(2008)NELF and GAGA factor are linked to promoter proximal pausing at many
genes in Drosophila. Mol Cell Biol. 28(10): 3290-300.
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Kuo PH, Kalsi G,
Prescott CA, Hodgkinson CA, Goldman D, van den Oord EJ, Alexander
J, Jiang C, Sullivan PF, Patterson DG, Walsh D, Kendler KS, Riley BP.
(2008) Association of ADH and ALDH Genes with Alcohol Dependence in the Irish
Affected Sib Pair Study of Alcohol Dependence (IASPSAD) Sample.Alcoholism:
Clinical and Experimental Research. 32(5): 785-95.
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Zhao, Z and Jiang,
C (2007) Methylation-Dependent Transition Rates Are Dependent on Local Sequence
Lengths and Genomic Regions. Mol Biol Evol., 24(1): 23-5.
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Jiang, C, Han, L,
Su, B, Li, WH and Zhao, Z (2007) Features and Trend of Loss of
Promoter-Associated CpG Islands in the Human and Mouse Genomes. Mol Biol
Evol. 24(9): 1991-2000.
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Jiang, C, Xuan, Z,
Zhao, F, and Zhang, MQ (2007) TRED: a Transcriptional Regulatory Element
Database, new entries and other development. Nucleic Acids Res., 35: D137-D140.
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Jiang, Cand Zhao,
Z (2006) Directionality of point mutation and 5-methylcytosine deamination
rates in the chimpanzee genome. BMC Genomics, 7(1): 316.
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Jiang, Cand Zhao,
Z (2006) Mutational spectrum in the recent human genome inferred by single
nucleotide polymorphisms. Genomics, 88(5): 527-34.
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Seo, D, Jiang, C
and Zhao, Z (2006) A novel statistical method to estimate the effective SNP
size in vertebrate genomes and categorized genomic regions. BMC Genomics, 7(1):
329.
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Boddu,
J, Jiang C, Sangar, V, Olson, T, Peterson, T, and Chopra, S (2006)
Comparative structural and functional characterization of sorghum and maize
duplications containing orthologous Myb transcription regulators of
3-deoxyflavonoid biosynthesis. Plant Molecular Biology, 60(2): 185-99.
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Jiang C, Gu,
X, and Peterson, T (2004) Identification of conserved gene structures and
carboxy-terminal motifs in the Myb gene family of Arabidopsisand Oryza sativaL.
ssp. indica. Genome Biology, 5(7): R46.
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Jiang C, Gu,
J, Chopra , S, Gu, X, and Peterson, T (2004) Ordered Origin of the Typical Two-
and Three-Repeat Myb Genes. Gene, 326: 13-22.
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Jiang C, Song,
W-Q, Li, X-L, Chen, R-Y(1998) Studies on microdissection and microcloning of
the rye chromosome 1R. Acta Botanica Sinica, 40(11): 988-993.